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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs6010472 chr22:49157038 A/T RPL3 chr22:39708887-39716394:- 0.56 6.61 1.02E-10 Box Plot
THCA rs6010472 chr22:49157038 A/T RPS19BP1 chr22:39925098-39928860:- 0.47 7.59 1.64E-13 Box Plot
THCA rs6010472 chr22:49157038 A/T SAMM50 chr22:44351301-44406411:+ 0.52 6.42 3.22E-10 Box Plot
THCA rs6010472 chr22:49157038 A/T SAPS2 chr22:50781760-50883514:+ 0.74 8.2 2.17E-15 Box Plot
THCA rs6010472 chr22:49157038 A/T SELO chr22:50639408-50656045:+ 0.53 8.06 6.05E-15 Box Plot
THCA rs6010472 chr22:49157038 A/T SF3A1 chr22:30727977-30752936:- 0.55 8.02 8.44E-15 Box Plot
THCA rs6010472 chr22:49157038 A/T SFI1 chr22:31884674-32014572:+ 0.46 6.17 1.43E-9 Box Plot
THCA rs6010472 chr22:49157038 A/T SGSM3 chr22:40766595-40806293:+ 0.52 7.54 2.34E-13 Box Plot
THCA rs6010472 chr22:49157038 A/T SMARCB1 chr22:24129150-24176703:+ 0.66 7.36 8.29E-13 Box Plot
THCA rs6010472 chr22:49157038 A/T SMCR7L chr22:39896105-39914136:+ 0.58 7.73 6.57E-14 Box Plot
THCA rs6010472 chr22:49157038 A/T SNAP29 chr22:21213271-21245506:+ 0.63 5.95 5.23E-9 Box Plot
THCA rs6010472 chr22:49157038 A/T SNRPD3 chr22:24951471-25005947:+ 0.65 8.45 3.6E-16 Box Plot
THCA rs6010472 chr22:49157038 A/T SRRD chr22:26879843-26890624:+ 0.64 6.74 4.46E-11 Box Plot
THCA rs6010472 chr22:49157038 A/T ST13 chr22:41220539-41253026:- 0.73 9.03 4.18E-18 Box Plot
THCA rs6010472 chr22:49157038 A/T SUN2 chr22:39130730-39190148:- 0.45 6.09 2.32E-9 Box Plot